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Erica Chen's picture

Research IT Staff Present at UC Berkeley CaVraCon

3D model of Egyptian sarcophagus constructed using photogrammetry software

Emerging image technologies took digital humanities to new heights in this year’s statewide CaVraCon [1], the biennial California Visual Resources Association Conference, which is affiliated with the Visual Resources Association. Librarians, archivists, and scholars gathered at UC Berkeley to discuss developments and issues in the field of image and media management.

Erica Chen's picture

Welcome to Berkeley Research Computing's Summer 2017 Interns

Research IT welcomes a UX/Visualization intern, a Journalism and Outreach intern, and two Coding/Database interns to the Berkeley Research Computing (BRC) team for summer 2017. Cassie Zhang, our returning UX/Visualization intern, will be implementing a “dashboard” for the Savio High Performance Compute cluster, a project continuing from spring 2017.

Challenges and Opportunities of VM Image Curation and Discovery

PEARC17 schedule screenshot, "Challenges and Opportunities of VM Image Curation and Discovery"

Virtual Machine (VM) images are being used more and more widely, across a range of research computation services. With the increasing creation and adoption of VM images, there is a need for maintenance regimes, discovery mechanisms, and curation practices to support researchers whose focus is on the use of these images, not their creation and upkeep.

Steve Masover's picture

Prof. Rachel Slaybaugh optimizes next-generation nuclear reactor design on BRC’s Savio cluster

Rachel Slaybaugh

It was her inner environmentalist that lured Asst. Professor Rachel Slaybaugh to Nuclear Engineering. “I have always been an environmentalist,” she explained. “When I was a freshman at Penn State I heard about this existing, large-scale, base load electricity source that didn’t emit air pollution, and I thought -- well, that sounds like a great way to get rid of coal plants -- I’m going to do that.” What Slaybaugh had heard about was nuclear power, which led to her B.S. in Nuclear Engineering from Penn State, then a Master’s and Ph.D. from the University of Wisconsin at Madison.

Steve Masover's picture

Singularity on Savio: containerized applications and mobility of computation

Singularity workflow, image credit: singularity.lbl.gov

Singularity is an emerging software tool that facilitates the movement of software applications and workflows between computational environments -- from a researcher’s laptop, to Berkeley’s high-performance computing cluster, Savio, to XSEDE’s national-scale clusters (e.g., Jetstream, Comet) or

Aaron Culich's picture

Sociology research on climate change reporting accelerated by AEoD virtual environments

Newspapers in a rack in Lisbon, Portugal. Photo credit: Harshil Shah, via Wikimedia Commons (Creative Commons License CC BY-SA 2.0)

Increasingly, the scale of data analysis means that computation can no longer be carried out on a laptop — often the only resource easily available to researchers. And while the Berkeley Research Computing (BRC) Program offers many powerful resources to researchers, it’s not always clear where to get started.

Jason C. Christopher's picture

Thank You, Aron Roberts!

Steve Masover and Aron Roberts, 2001

With a mix of sadness and cheer, we bid Aron Roberts a fond farewell from UC Berkeley, as he retires from the university and pursues other endeavors in the private sector. For the last eight years, Aron has worked with Research IT, and its predecessor, Data Services, as an Application Programmer. Between 2013 and 2014, he served on the team that helped to establish the current identity and direction of Research IT, and provided in-depth consulting to researchers to support their research computing needs.

Notebook environments support Prof. Carl Boettiger's ecosystem modeling and data sharing

Asst. Prof. Carl Boettiger; photo credit: Paul Krichner

As a physics student at Princeton University, Assistant Professor Carl Boettiger had no intention of working with computers: he says he was essentially “pulled in by accident.” During his time as an undergraduate, Boettiger gradually broadened his interests from physics, which he believed to be the type of science done solely on a chalkboard, to biophysics and ecology.

Using rclone to transfer data to bDrive

RClone Browser screen shot

The bDrive repository offers everyone at UC Berkeley unlimited storage, strong search capabilities, and mobile access. This storage is an important data management resource for research teams. The standard web client, however, does not always work well when dealing with very large files, many files, or deep folder structures. The web client’s connection is slow, and can disconnect in the midst of a lengthy, time-consuming transfer.